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atlasBREX

imported

software/atlasbrex

atlasBREX: Automated averaged template-derived brain extraction in animal MRI

Machine-generated from the listed sources and not yet reviewed by a human.

atlasBREX project image
GitHub preview card for jlohmeier/atlasBREX. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
BSD-3-Clause(osi)
Status
dormant
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
unknown
Documentation
unknown
Tags
ants · atlas · bash · brain · brain-extraction · extraction · fsl · mri · registration · script · skullstrip · template
Regulatory
unknown
similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • macapypeants · brain-extraction · fsl · mri

    PNH segmentation pipelines based on nipype

  • antx2atlas · mri · registration

    Registration of animal MR brain data to a standard (published) atlas. The pipeline works with invivo or exvivo (skull-stripped) MR-data for the following species: mouse, rat, Etruscan shrew and cat.…

  • erwinants · fsl · mri

    Quantitative MRI toolbox in Python

  • ROILocants · mri · registration

    Python script based on ANTs to locate (center & crop) any region given in the CerebrA atlas, while keeping the MRI in its native space.

  • preprocessingbrain · brain-extraction · mri

    preprocessing tools for multi-modal 3D brain imaging

  • OAI_analysis_2atlas · registration

    Image analysis approaches to analyze the OAI magnetic resonance images

sources
  1. api.github.com/repos/jlohmeier/atlasBREX
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2024-01-15, 18 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/61.json→ .entries["atlasbrex"]

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