atlasBREX
importedsoftware/atlasbrex
atlasBREX: Automated averaged template-derived brain extraction in animal MRI
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/jlohmeier/atlasBREX
- Documentation
- unknown
- Tags
- ants · atlas · bash · brain · brain-extraction · extraction · fsl · mri · registration · script · skullstrip · template
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- macapypeants · brain-extraction · fsl · mri
PNH segmentation pipelines based on nipype
- antx2atlas · mri · registration
Registration of animal MR brain data to a standard (published) atlas. The pipeline works with invivo or exvivo (skull-stripped) MR-data for the following species: mouse, rat, Etruscan shrew and cat.…
- erwinants · fsl · mri
Quantitative MRI toolbox in Python
- ROILocants · mri · registration
Python script based on ANTs to locate (center & crop) any region given in the CerebrA atlas, while keeping the MRI in its native space.
- preprocessingbrain · brain-extraction · mri
preprocessing tools for multi-modal 3D brain imaging
- OAI_analysis_2atlas · registration
Image analysis approaches to analyze the OAI magnetic resonance images
- api.github.com/repos/jlohmeier/atlasBREXretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2024-01-15, 18 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/61.json→ .entries["atlasbrex"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.