BakingTray
importedsoftware/bakingtray
Serial-section automated anatomy extension for ScanImage
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- LGPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- SWC-Advanced-Microscopy
- Country
- unknown
- Homepage
- bakingtray.mouse.vision/
- Documentation
- unknown
- Tags
- 2-photon · anatomy · imaging · matlab · microscopy · neuroanatomy · neuroscience · scanimage
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- cellfinderimaging · microscopy · neuroanatomy · neuroscience
Automated 3D cell detection in very large images
- ScanImageToolsmicroscopy · scanimage
MATLAB tools for running imaging experiments with ScanImage
- brainregmicroscopy · neuroanatomy · neuroscience
Automated 3D brain registration with support for multiple species and atlases.
- StitchItanatomy · imaging · microscopy · neuroscience
Stitching of large tiled datasets
- DTI-NODDIneuroanatomy · neuroscience
:brain: DTI-NODDI: Create NODDI maps from DTI (either "FA and MD" or "L1, L2, and L3")
- lifeneuroanatomy · neuroscience
Please use the new version of LiFE: www.github.com/brain-life/encode
- api.github.com/repos/SWC-Advanced-Microscopy/BakingTrayretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-08, 18 stars, license reported as LGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/55.json→ .entries["bakingtray"]
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