biocommons.seqrepo
importedsoftware/biocommons-seqrepo
non-redundant, compressed, journalled, file-based storage for biological sequences
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- biocommons
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/biocommons/biocommons.seqrepo
- Documentation
- unknown
- Tags
- bioinformatics · genome-analysis · genomics · sequencing · variant-analysis · variation
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hgvsbioinformatics · genome-analysis · genomics · sequencing · variant-analysis · variation
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
- vrsbioinformatics · genomics · variation
Extensible specification for representing and uniquely identifying biological sequence variation
- Ariocbioinformatics · genomics · variant-analysis
Arioc: GPU-accelerated DNA short-read alignment
- BRIGbioinformatics · genome-analysis · genomics
BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.
- COGclassifierbioinformatics · genome-analysis · genomics
A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category
- Genome-on-Dietbioinformatics · genome-analysis · genomics
Genome-on-Diet is a fast and memory-frugal framework for exemplifying sparsified genomics for read mapping, containment search, and metagenomic profiling. It is much faster & more memory-efficient…
- api.github.com/repos/biocommons/biocommons.seqreporetrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-11-10, 52 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/27.json→ .entries["biocommons-seqrepo"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.