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Bismark

imported

software/bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

Machine-generated from the listed sources and not yet reviewed by a human.

Bismark project image
GitHub preview card for FelixKrueger/Bismark. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Documentation
unknown
Tags
bioinformatics · dna · methylation
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • Ariocbioinformatics · methylation

    Arioc: GPU-accelerated DNA short-read alignment

  • deepsignalbioinformatics · methylation

    Detecting methylation using signal-level features from Nanopore sequencing reads

  • MethylDackelbioinformatics · methylation

    A (mostly) universal methylation extractor for BS-seq experiments.

  • nanopolishbioinformatics · methylation

    Signal-level algorithms for MinION data

  • EpiMethExbioinformatics · methylation

    EpiMethEx (Epigenetic Methylation and Expression), a R package to perform a large-scale integrated analysis by cyclic correlation analyses between methylation and gene expression data.

  • adaptbioinformatics · dna

    A package for designing activity-informed nucleic acid diagnostics for viruses.

sources
  1. api.github.com/repos/FelixKrueger/Bismark
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-08-03, 455 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/48.json→ .entries["bismark"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.