cacao

imported

software/cacao

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

Machine-generated from the listed sources and not yet reviewed by a human.

cacao project image — GitHub preview card for sigven/cacao. Served by its origin, not stored here, and not covered by this registry’s licence.

record

Category: Software & Systems
Subcategory: unknown
License: MIT(osi)
Status: dormant
Maturity: deployed
Organization: unknown
Country: unknown
Homepage: unknown
Repository: github.com/sigven/cacao
Documentation: unknown
Tags: alignment · bam · cancer · cancer-genomics · clinical-decision-support · command-line-tool · coverage-report · next-generation-sequencing
Regulatory: unknown

built by · 1

sigven

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

fetch_ngsbam · next-generation-sequencing
Workflow to Fetch Public Sequencing Data and Metadata Using iSeq and MrBiomics Module.
rasusaalignment · bam
Randomly subsample sequencing reads or alignments
HGG-oncohistonescancer · cancer-genomics
Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" (Jessa et al, Nature Genetics, 2022)
pyGenocancer · cancer-genomics
Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
SBMClonecancer · cancer-genomics
SBMClone, a method for recovering tumor clonal composition from sparse single-cell mutation data
bioinformatics-toolkitcommand-line-tool
Command-line tools for genomics and proteomics analysis

sources

api.github.com/repos/sigven/cacao
retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2020-12-08, 21 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

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machine-readable

/v1/entries/38.json→ .entries["cacao"]

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