Carafe
importedsoftware/carafe
High quality in silico spectral library generation for data-independent acquisition proteomics
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- Noble-Lab
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/Noble-Lab/Carafe
- Documentation
- unknown
- Tags
- data-independent-acquisition · deep-learning · mass-spectrometry · proteomics · spectral-library
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- mzSpecLibmass-spectrometry · proteomics · spectral-library
mzSpecLib: A standard format to exchange/distribute spectral libraries
- Avant_gardedata-independent-acquisition · mass-spectrometry · proteomics
Avant-garde (AvG) is a new tool to refine Data-Independent Acquisition (and Parallel Reaction Monitoring) by removing interfered transitions, adjusting integration boundaries and scoring peaks to…
- manuscript-qc-system-suitabilitydata-independent-acquisition · mass-spectrometry · proteomics
This repository is associated with a peer-reviewed article in the Journal of Proteome Research describing the MacCoss laboratory's quality control measures for sample preparation, system…
- nettledata-independent-acquisition · mass-spectrometry · proteomics
Nettle is an RT imputation method for MS proteomics
- pyprophetdata-independent-acquisition · mass-spectrometry · proteomics
PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
- rustimsdata-independent-acquisition · mass-spectrometry · proteomics
A Framework for IMS-MS Raw Data Processing written in Rust and Python.
- api.github.com/repos/Noble-Lab/Caraferetrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-06-19, 23 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/21.json→ .entries["carafe"]
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