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cellSNP

imported

software/cellsnp

Pileup biallelic SNPs from single-cell and bulk RNA-seq data

Machine-generated from the listed sources and not yet reviewed by a human.

cellSNP project image
GitHub preview card for single-cell-genetics/cellSNP. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
Apache-2.0(osi)
Status
dormant
Maturity
deployed
Organization
single-cell-genetics
Country
unknown
Homepage
unknown
Documentation
unknown
Tags
genetic-variants · genotyping · rna-seq · single-cell
Regulatory
unknown
built by · 2

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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    Thesaurus for genetic variants

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    A tool to detect acquired AMR genes directly from long read sequencing data.

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    Nextflow pipeline for species-specific typing of bacteria

  • EcoliTypergenotyping

    EcoliTyper: A species-optimized computational pipeline for comprehensive genotyping and surveillance of Escherichia coli. Perfect for clinical microbiology, outbreak investigations, and genomic…

sources
  1. api.github.com/repos/single-cell-genetics/cellSNP
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2022-06-09, 84 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/44.json→ .entries["cellsnp"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.