CSBFinder

imported

software/csbfinder

A Java Desktop application with a graphical user interface for the discovery of colinear syntenic blocks across thousands microbial genomes

Machine-generated from the listed sources and not yet reviewed by a human.

record

Category: Software & Systems
Subcategory: unknown
License: Apache-2.0(osi)
Status: maintained
Maturity: deployed
Organization: unknown
Country: unknown
Homepage: unknown
Repository: github.com/dinasv/CSBFinder
Documentation: unknown
Tags: gene-order · gene-orthology · genomics · microbial-genomics · pattern-mining · synteny
Regulatory: unknown

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

cogegenomics · synteny
CoGe (Comparative Genomics) Platform
treevalgenomics · synteny
Pipelines for the production of Treeval data
albatradisgenomics · microbial-genomics
Comparative TraDIS analysis
ANIclustermapgenomics · microbial-genomics
A tool for drawing ANI clustermap between all-vs-all microbial genomes
bac-genomics-scriptsgenomics · microbial-genomics
Collection of scripts for bacterial genomics
COGclassifiergenomics · microbial-genomics
A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category

sources

api.github.com/repos/dinasv/CSBFinder
retrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-10-29, 30 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/55.json→ .entries["csbfinder"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.