gget

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software/gget

🧬 gget enables efficient querying of genomic reference databases

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gget project image — GitHub preview card for scverse/gget. Served by its origin, not stored here, and not covered by this registry’s licence.

record

Category: Software & Systems
Subcategory: unknown
License: BSD-2-Clause(osi)
Status: active
Maturity: deployed
Organization: scverse
Country: unknown
Homepage: scverse.org/gget
Repository: github.com/scverse/gget
Documentation: unknown
Tags: alphafold · alphafold2 · archs4 · blast · cellxgene · databases · enrichment-analysis · enrichr
Regulatory: unknown

built by · 6

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similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

enrich_omicsenrichment-analysis · enrichr
A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)
PHIStructalphafold · alphafold2
Published in Bioinformatics. Phage-host interaction prediction tool that incorporates protein structure information in representing receptor-binding proteins (RBPs). It improves performance…
pymol-color-alphafoldalphafold · alphafold2
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
Data-Parser-Systemdatabases
:apple: Simple script that parses data from open source databases to the standard Lifyzer database structure :green_apple:
MMseqs2-Appalphafold2
MMseqs2 app to run on your workstation or servers
BgeeDB_Renrichment-analysis
Source code of the R packge BgeeDB to use data from the Bgee database

sources

api.github.com/repos/scverse/gget
retrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-03, 1183 stars, license reported as BSD-2-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.

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/v1/entries/34.json→ .entries["gget"]

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