HiCExplorer
importedsoftware/hicexplorer
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- deeptools
- Country
- unknown
- Homepage
- hicexplorer.readthedocs.org
- Repository
- github.com/deeptools/HiCExplorer
- Documentation
- unknown
- Tags
- bioinformatics · chromosome-conformation-capture · galaxy · genomics · hic · python
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hictkbioinformatics · genomics · hic
Blazing fast toolkit to work with .hic and .cool files
- deepStatsgalaxy · genomics
deepStats: a stastitical toolbox for deeptools and genomic signals
- docker-galaxypgalaxy
:whale: Galaxy Docker repository with tools for proteomics (GalaxyP flavour)
:books::whale: Galaxy flavor for Cheminformatics
- galaxytoolsgalaxy
:microscope::books: Galaxy Tool wrappers
- adambioinformatics · genomics
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
- api.github.com/repos/deeptools/HiCExplorerretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-07-17, 275 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/44.json→ .entries["hicexplorer"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.