openmedical/registry
← registry

HTStream

imported

software/htstream

A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes

Machine-generated from the listed sources and not yet reviewed by a human.

HTStream project image
GitHub preview card for s4hts/HTStream. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
Apache-2.0(osi)
Status
active
Maturity
deployed
Organization
s4hts
Country
unknown
Documentation
unknown
Tags
bioinformatics · bioinformatics-tool · genomics · linux-pipes · next-generation-sequencing · sequence-analysis · streaming
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • bioinformatics-toolkitbioinformatics · genomics · sequence-analysis

    Command-line tools for genomics and proteomics analysis

  • chromapbioinformatics · genomics · sequence-analysis

    Fast alignment and preprocessing of chromatin profiles

  • genedexbioinformatics · genomics · sequence-analysis

    A small and fast FM-Index for Rust

  • lightmotifbioinformatics · genomics · sequence-analysis

    A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

  • pyMSAvizbioinformatics · genomics · sequence-analysis

    MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

  • FinaleToolkitbioinformatics · bioinformatics-tool · genomics

    FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.

sources
  1. api.github.com/repos/s4hts/HTStream
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-01, 50 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/33.json→ .entries["htstream"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.