jgi-query

imported

software/jgi-query

A simple command-line tool to download data from Joint Genome Institute databases

Machine-generated from the listed sources and not yet reviewed by a human.

jgi-query project image — GitHub preview card for glarue/jgi-query. Served by its origin, not stored here, and not covered by this registry’s licence.

record

Category: Software & Systems
Subcategory: unknown
License: MPL-2.0(osi)
Status: dormant
Maturity: deployed
Organization: unknown
Country: unknown
Homepage: unknown
Repository: github.com/glarue/jgi-query
Documentation: unknown
Tags: bioinformatics · cli · genomes · genomics · python
Regulatory: unknown

built by · 3

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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genome_updater is a bash script that downloads and updates (non-redundant) snapshots of the NCBI Genomes repository (RefSeq/GenBank) with advanced filters, detailed logs and reports, file integrity…
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adambioinformatics · genomics
ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
adaptbioinformatics · genomics
A package for designing activity-informed nucleic acid diagnostics for viruses.

sources

api.github.com/repos/glarue/jgi-query
retrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2023-01-19, 51 stars, license reported as MPL-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/60.json→ .entries["jgi-query"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.