NCHHSTP-DTBE-Varpipe-WGS
importedsoftware/nchhstp-dtbe-varpipe-wgs
This repository contains an analysis pipeline developed to characterize WGS output
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- CDCgov
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- bioinformatics · bioinformatics-pipeline · genomics · pipeline · variant-annotations · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- ilusbioinformatics · bioinformatics-pipeline · pipeline · variant-calling
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis by using GATK and Sentieon. 一个基于 GATK 和 Sentieon 的简易且全面的…
- kGWASflowbioinformatics · bioinformatics-pipeline · genomics · pipeline
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
- scanPAVbioinformatics · bioinformatics-pipeline · genomics · pipeline
Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.
- snakemake-illumina-gatkvariantbioinformatics · variant-annotations · variant-calling
A Snakemake workflow for variant calling using GATK4 best practices
- echtvargenomics · variant-annotations
using all the bits for echt rapid variant annotation and filtering
- walkercreekbioinformatics · genomics · pipeline · variant-calling
A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.
- api.github.com/repos/CDCgov/NCHHSTP-DTBE-Varpipe-WGSretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-05-19, 8 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
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