nellie

imported

software/nellie

Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

Machine-generated from the listed sources and not yet reviewed by a human.

nellie project image — GitHub preview card for aelefebv/nellie. Served by its origin, not stored here, and not covered by this registry’s licence.

record

Category: Software & Systems
Subcategory: unknown
License: CC-BY-4.0(cc)
Status: active
Maturity: deployed
Organization: unknown
Country: unknown
Homepage: unknown
Repository: github.com/aelefebv/nellie
Documentation: unknown
Tags: biology · fluorescence · image-analysis · image-processing · machine-learning · microscopy · organelles · segmentation · tracking
Regulatory: unknown

built by · 1

aelefebv

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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frcimage-analysis · image-processing · microscopy
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mcmicroimage-analysis · image-processing · microscopy
An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.

sources

api.github.com/repos/aelefebv/nellie
retrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-05-15, 98 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as CC-BY-4.0, because GitHub's detector does not recognise open hardware licences.

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machine-readable

/v1/entries/6.json→ .entries["nellie"]

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