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omicverse

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software/omicverse

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Machine-generated from the listed sources and not yet reviewed by a human.

omicverse project image
GitHub preview card for omicverse/omicverse. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
omicverse
Country
unknown
Documentation
unknown
Tags
bioinformatics · bulk-rna-seq · omics · single-cell
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • gEARbulk-rna-seq · single-cell

    The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.

  • cell2cellbioinformatics · bulk-rna-seq

    User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

  • Phenoversebioinformatics · omics · single-cell

    Deep interpretable learning of sample representations for characterizing disease states in single-cell transcriptomics

  • scDatasetbioinformatics · omics · single-cell

    scDataset: Scalable Data Loading for Deep Learning on Large-Scale Single-Cell Omics

  • Muon.jlomics · single-cell

    Muon for Julia

  • optimaomics · single-cell

    An open-source R package for the Tapestri platform for integrative single cell multiomics data analysis

sources
  1. api.github.com/repos/omicverse/omicverse
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-30, 1178 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/38.json→ .entries["omicverse"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.