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OT-scOmics

imported

software/ot-scomics

This Python package will allow you to replicate the experiments from our research on applying Optimal Transport as a similarity metric in between single-cell omics data.

Machine-generated from the listed sources and not yet reviewed by a human.

OT-scOmics project image
GitHub preview card for cantinilab/OT-scOmics. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
dormant
Maturity
deployed
Organization
cantinilab
Country
unknown
Homepage
ot-scomics.rtfd.io
Repository
github.com/cantinilab/OT-scOmics
Documentation
unknown
Tags
biology · gpu · optimal-transport · single-cell
Regulatory
unknown
built by · 2

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • conditional-monge-gapoptimal-transport · single-cell

    Conditional Monge Gap (2026; Nature Machine Intelligence)

  • moscotoptimal-transport · single-cell

    Multi-omic single-cell optimal transport tools

  • Mowglioptimal-transport · single-cell

    Single-cell multi-omics integration using Optimal Transport

  • PILOT-GM-VAEoptimal-transport · single-cell

    Patient-Level Analysis of Single Cell Disease Atlas with Optimal Transport of Gaussian Mixtures Variational Autoencoders

  • scconfluenceoptimal-transport · single-cell

    A novel method for single-cell diagonal integration: scConfluence

  • wotoptimal-transport · single-cell

    A software package for analyzing snapshots of developmental processes

sources
  1. api.github.com/repos/cantinilab/OT-scOmics
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2023-02-03, 43 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/0.json→ .entries["ot-scomics"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.