phastaf
importedsoftware/phastaf
Identify phage regions in bacterial genomes for masking purposes
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/tseemann/phastaf
- Documentation
- unknown
- Tags
- bacteria · bioinformatics · genomics · phage
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- phigarobioinformatics · genomics · phage
Phigaro is a scalable command-line tool for predicting phages and prophages
- zolbioinformatics · genomics · phage
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
- PHANOTATEgenomics · phage
PHANOTATE: a gene caller for phages.
- chewBBACAbacteria · bioinformatics · genomics
BSR-Based Allele Calling Algorithm
- snippybacteria · bioinformatics · genomics
:scissors: :zap: Rapid haploid variant calling and core genome alignment
- bactmapbacteria · genomics
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- api.github.com/repos/tseemann/phastafretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2019-09-05, 33 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/24.json→ .entries["phastaf"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.