proatac
importedsoftware/proatac
Preprocessing pipeline for (sc)ATAC data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- buenrostrolab.com/proatac
- Repository
- github.com/caleblareau/proatac
- Documentation
- unknown
- Tags
- atac-seq · epigenetics · pipeline · single-cell · snakemake
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- gchromVARatac-seq · epigenetics · single-cell
Cell type specific enrichments using finemapped variants and quantitative epigenetic data
- seq2scienceatac-seq · pipeline · snakemake
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
- scATAC-proatac-seq · pipeline · single-cell
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
- snsatac-seq · pipeline
Analysis pipelines for genomic sequencing data
- bapepigenetics · single-cell
Bead-based single-cell atac processing
- deepcpgepigenetics · single-cell
Deep neural networks for predicting CpG methylation
- api.github.com/repos/caleblareau/proatacretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2022-02-22, 10 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/53.json→ .entries["proatac"]
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