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prot-rna-umap-clustering

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software/prot-rna-umap-clustering

Joint UMAP embedding and clustering of proteomic and transcriptomic data

Machine-generated from the listed sources and not yet reviewed by a human.

prot-rna-umap-clustering project image
GitHub preview card for dev-ev/prot-rna-umap-clustering. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
dormant
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
unknown
Repository
github.com/dev-ev/prot-rna-umap-clustering
Documentation
unknown
Tags
clustering · jupyterlab · mass-spectrometry · proteomics · proteomics-data-integration · tmt-data-analysis · transcriptomics · umap
Regulatory
unknown
similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • isobaric-inspection-jupyterjupyterlab · mass-spectrometry · proteomics

    Inspecting the quality of isobaric labeling proteomic data in a Jupyter notebook. Data output from Proteome Discoverer.

  • isobaric-prot-wf-rproteomics · tmt-data-analysis

    Simple workflows for the isobaric-labeling proteomic data from Proteome Discoverer with ANOVA, t-testing, DEqMS/limma and annotation via fgsea

  • MSConnectproteomics · proteomics-data-integration

    MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.

  • Raw_File_Uploaderproteomics · proteomics-data-integration

    Tool to automatically upload result file to Proteomics Data Manager (mainly for MS based proteomics)

  • BadranSequmap

    The scRNA-seq figures your paper deserves. One package, zero boilerplate.

  • pytorch-hcsumap

    Predict drug mechanism of action from high content screening images using PyTorch

sources
  1. api.github.com/repos/dev-ev/prot-rna-umap-clustering
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2022-03-15, 6 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/47.json→ .entries["prot-rna-umap-clustering"]

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