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qupath

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software/qupath

QuPath - Open-source bioimage analysis for research

Machine-generated from the listed sources and not yet reviewed by a human.

qupath project image
GitHub preview card for qupath/qupath. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
qupath
Country
unknown
Homepage
qupath.github.io
Repository
github.com/qupath/qupath
Documentation
unknown
Tags
bioimage-analysis · bioimage-informatics · cell-analysis · cell-segmentation · computational-pathology · digital-pathology · groovy · histology
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • CLAMbioimage-informatics · computational-pathology · digital-pathology

    Open source tools for computational pathology - Nature BME

  • DeepSpot2Cellcell-segmentation · computational-pathology · digital-pathology

    DeepSpot2Cell: Predicting virtual single-cell spatial transcriptomics from H&E images using spot-level supervision

  • tiatoolboxcell-segmentation · computational-pathology · digital-pathology

    Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

  • brain_tissue_nuc_segmbioimage-analysis · cell-segmentation

    Segmentation of nuclear signals in fluorescently stained mouse brain tissue sections. Segmentations performed with a fine-tuned Stardist 3D model and/or Cellpose

  • micro-sambioimage-analysis · cell-segmentation

    Segment Anything for Microscopy

  • DryMasscell-analysis

    manipulation and analysis of phase microscopy data

sources
  1. api.github.com/repos/qupath/qupath
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-08-05, 1413 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/28.json→ .entries["qupath"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.