scarf
importedsoftware/scarf
Memory-efficient single-cell analysis in Python. Stream RNA, ATAC, CITE-seq and multi-omics from local or remote Zarr stores, from laptop to atlas scale, with reusable fingerprinted results.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- NygenAnalytics
- Country
- unknown
- Homepage
- scarf.readthedocs.io
- Repository
- github.com/NygenAnalytics/scarf
- Documentation
- unknown
- Tags
- object-storage · provenance-tracking · scalable-computing · scrna-seq-analysis · single-cell · single-cell-multiomics · single-cell-omics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- SPLiT-Seq_demultiplexingscrna-seq-analysis · single-cell · single-cell-omics
An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data
- COSGsingle-cell · single-cell-multiomics
Accurate and fast cell marker gene identification with COSG
- GLUEsingle-cell · single-cell-multiomics
Graph-linked unified embedding for single-cell multi-omics data integration
- cellestialsingle-cell · single-cell-omics
An Interactive and Highly Customizable Single-Cell and Spatial Biology Plotting Library
- LabelCorrectionsingle-cell · single-cell-omics
Python code for cross-condition label refinement in single-cell data with HiDDEN
- pixelatorsingle-cell · single-cell-omics
A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) and Proximity Network (PNA) assays.
- api.github.com/repos/NygenAnalytics/scarfretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 119 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/62.json→ .entries["scarf"]
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