SCICoNE
importedsoftware/scicone
Single-cell copy number calling and event history reconstruction.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- cbg-ethz
- Country
- unknown
- Repository
- github.com/cbg-ethz/SCICoNE
- Documentation
- unknown
- Tags
- bayesian-inference · cancer-genomics · copy-number-variation · mcmc · single-cell
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- BENPPymcmc
Python implementation of BayesENproteomics with user-customised models and other additional features
- CNVcopy-number-variation
Copy Number Variation
- SCEVANcopy-number-variation
R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of…
- BITFAMbayesian-inference · single-cell
BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021)…
- Genes2Genesbayesian-inference · single-cell
Aligning gene expression trajectories of single-cell reference and query systems
- sisuabayesian-inference · single-cell
SemI-SUpervised generative Autoencoder models for single cell data
- api.github.com/repos/cbg-ethz/SCICoNEretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-05-13, 28 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/21.json→ .entries["scicone"]
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