seurigiotto-benchmark-framework
importedsoftware/seurigiotto-benchmark-framework
Optimized pipelines for Spatial Transcriptomics (ST) data analysis using Seurat & Giotto, designed for reproducible benchmarking and biological insight.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- 10x-genomics · benchmark · bioinformatics · computational-biology · data-analysis · data-visualization · deconvolution · genomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- NGSOmics_Programming10x-genomics · deconvolution · genomics
Computational biology/bioinformatics workflows, codes, tech & concept notes on NGS data
- MetaInformAntbioinformatics · computational-biology · data-visualization · genomics
METAINFORMANT is a Python 3.11+ multi-omic bioinformatics toolkit spanning 28 modules and 650+ files for DNA, RNA-seq, protein, epigenome and single-cell analysis, GWAS with fine-mapping and eQTL,…
- medical-research-skillsbioinformatics · computational-biology · data-analysis · data-visualization
Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.
- ChatSpatialbioinformatics · computational-biology · deconvolution · genomics
MCP server for spatial transcriptomics analysis through natural language interfaces.
- spatialvi10x-genomics · bioinformatics
Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.
- dancebenchmark · bioinformatics · computational-biology
DANCE: a deep learning library and benchmark platform for single-cell analysis
- api.github.com/repos/Nuiter/seurigiotto-benchmark-frameworkretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2025-11-26, 9 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
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