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svtyper

imported

software/svtyper

Bayesian genotyper for structural variants

Machine-generated from the listed sources and not yet reviewed by a human.

svtyper project image
GitHub preview card for hall-lab/svtyper. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
hall-lab
Country
unknown
Homepage
unknown
Documentation
unknown
Tags
bioinformatics · genomics · genotype · vcf
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • peddybioinformatics · genomics · genotype · vcf

    genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF

  • adVNTRbioinformatics · genomics · genotype

    A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data

  • phaseimputebioinformatics · genomics · genotype

    A bioinformatics pipeline to phase and impute genetic data

  • cljambioinformatics · genomics · vcf

    A DNA Sequence Alignment/Map (SAM) library for Clojure

  • CuteVCFbioinformatics · genomics · vcf

    simple viewer for variant call format using htslib

  • cyvcf2bioinformatics · genomics · vcf

    cython + htslib == fast VCF and BCF processing

sources
  1. api.github.com/repos/hall-lab/svtyper
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-04-13, 136 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/50.json→ .entries["svtyper"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.