tools
importedsoftware/tools
Python package with helper tools for the nf-core community.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- nf-core
- Country
- unknown
- Homepage
- nf-co.re
- Repository
- github.com/nf-core/tools
- Documentation
- unknown
- Tags
- bioinformatics · linter · linting · nextflow · nf-core · pipeline · python · workflow
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- circrnabioinformatics · nextflow · nf-core · pipeline · workflow
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
- eagerbioinformatics · nextflow · nf-core · pipeline · workflow
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
- phaseimputebioinformatics · nextflow · nf-core · pipeline · workflow
A bioinformatics pipeline to phase and impute genetic data
- taxprofilerbioinformatics · nextflow · nf-core · pipeline · workflow
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
- bactmapnextflow · nf-core · pipeline · workflow
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- circdnanextflow · nf-core · pipeline · workflow
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
- api.github.com/repos/nf-core/toolsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-05, 318 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/28.json→ .entries["tools"]
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