variantcalling
importedsoftware/variantcalling
Nextflow DSL2 pipeline to call variants on long read alignment.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- sanger-tol
- Country
- unknown
- Repository
- github.com/sanger-tol/variantcalling
- Documentation
- unknown
- Tags
- alignment · genomics · nextflow · pipeline · variant-calling · workflow
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- pacvaralignment · nextflow · pipeline · variant-calling
Longread PacBio sequencing processing for WGS and PureTarget
- variantbenchmarkingnextflow · pipeline · variant-calling · workflow
Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
- bactmapgenomics · nextflow · pipeline · workflow
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- circdnagenomics · nextflow · pipeline · workflow
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
- circrnagenomics · nextflow · pipeline · workflow
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
- deepmodeloptimgenomics · nextflow · pipeline · workflow
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
- api.github.com/repos/sanger-tol/variantcallingretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-04, 11 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/54.json→ .entries["variantcalling"]
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