viralmetagenome
importedsoftware/viralmetagenome
A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- nf-core
- Country
- unknown
- Homepage
- nf-co.re/viralmetagenome/
- Repository
- github.com/nf-core/viralmetagenome
- Documentation
- unknown
- Tags
- epidemiology · fastq · nextflow · nf-core · ngs · pipeline · viral-metagenomics · virology
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- circrnanextflow · nf-core · ngs · pipeline
circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data
- seq2sciencefastq · ngs · pipeline
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
- bactmapnextflow · nf-core · pipeline
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
- circdnanextflow · nf-core · pipeline
Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.
- deepmodeloptimnextflow · nf-core · pipeline
Stochastic Testing and Input Manipulation for Unbiased Learning Systems
- diaproteomicsnextflow · nf-core · pipeline
Automated quantitative analysis of DIA proteomics mass spectrometry measurements.
- api.github.com/repos/nf-core/viralmetagenomeretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-04, 40 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/35.json→ .entries["viralmetagenome"]
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