ccdutils
importedtherapeutics/ccdutils
A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Therapeutics
- Subcategory
- unknown
- License
- Apache-2.0(osi)
- Status
- active
- Maturity
- deployed
- Organization
- PDBeurope
- Country
- unknown
- Homepage
- pdbeurope.github.io/ccdutils/
- Repository
- github.com/PDBeurope/ccdutils
- Documentation
- unknown
- Tags
- bioinformatics · chemical-components · chemical-database · cheminformatics · ligands · mmcif · pdb · python
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- relligbioinformatics · cheminformatics · ligands · mmcif · pdb
Identifies relevant ligands in the PDB
- vscode-molstar-litebioinformatics · cheminformatics · mmcif · pdb
Lightweight Mol* 3D molecular viewer for VS Code — thumbnail grid browser + syntax highlighting for 15+ formats
- pdbrustcheminformatics · mmcif · pdb
A Rust library for parsing PDB (Protein Data Bank) files
- arpeggiobioinformatics · mmcif · pdb
Calculation of interatomic interactions in molecular structures
- Burettecheminformatics · pdb
macOS menu bar app and Quick Look extension for molecular previews: Mol* 3D, fast XYZ, xyzrender SVG, and RDKit grids.
- PDB-CATmmcif
PDB-CAT aims to automatically categorize the mmCIF PDB structures based on the type of interaction between atoms in the protein and the ligand, and checking for any mutations in the sequence.
- api.github.com/repos/PDBeurope/ccdutilsretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-21, 83 stars, license reported as Apache-2.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/14.json→ .entries["ccdutils"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.