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ASAP

imported

data/asap

ASAP : Automated Single-cell Analysis Pipeline

Machine-generated from the listed sources and not yet reviewed by a human.

ASAP project image
GitHub preview card for DeplanckeLab/ASAP. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Data & Standards
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
DeplanckeLab
Country
unknown
Homepage
asap.epfl.ch
Repository
github.com/DeplanckeLab/ASAP
Documentation
unknown
Tags
asap · bioinformatics · bioinformatics-pipeline · clustering · differential-expression · differential-gene-expression · enrichment · filtering · gene-expression · normalization · ontology · pca · rna-seq · single-cell · t-sne · transcriptomics · visualization · web-app · web-application · web-tool
Regulatory
unknown
similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • Yeskitclustering · differential-expression · enrichment · single-cell · visualization

    Yet another single-cell analysis toolkit

  • iDEAdifferential-gene-expression · rna-seq · single-cell

    Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)

  • PyDESeq2bioinformatics · differential-expression · rna-seq · transcriptomics

    A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  • normalisrdifferential-expression · normalization · single-cell

    Causal inference, differential expression, and co-expression for scRNA-seq

  • oracle-scrna-seqbioinformatics · differential-expression · single-cell · transcriptomics

    Single-cell RNA-seq following scverse practices: QC, doublet detection, normalization, batch correction, clustering, marker genes, and cell-type annotation, with optional trajectory analysis.

  • decouplerbioinformatics · enrichment · single-cell

    Python package to perform enrichment analysis from omics data.

sources
  1. api.github.com/repos/DeplanckeLab/ASAP
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2026-03-10, 28 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/28.json→ .entries["asap"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.