plasmidtron
importeddata/plasmidtron
Assembling the cause of phenotypes and genotypes from NGS data
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Data & Standards
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- sanger-pathogens
- Country
- unknown
- Repository
- github.com/sanger-pathogens/plasmidtron
- Documentation
- unknown
- Tags
- bioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen · research
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- albatradisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
Comparative TraDIS analysis
- aribabioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
Antimicrobial Resistance Identification By Assembly
- Artemisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
- Bio-Tradisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
A set of tools to analyse the output from TraDIS analyses
- circlatorbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
A tool to circularize genome assemblies
- gff3toemblbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen
Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI
- api.github.com/repos/sanger-pathogens/plasmidtronretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2020-06-11, 29 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/10.json→ .entries["plasmidtron"]
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