MicrobiomeBestPracticeReview
importedprotocols/microbiomebestpracticereview
Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Protocols & Guidelines
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- grimmlab
- Country
- unknown
- Homepage
- www.bit.cs.tum.de/
- Documentation
- unknown
- Tags
- 16s-rrna · amplicon-sequencing · assembly · best-practices · bioinformatics · biomedical · metagenomics · microbiome · microbiome-analysis · microbiome-workflow · pipeline
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- funcscanassembly · bioinformatics · metagenomics · pipeline
(Meta-)genome screening for functional and natural product gene sequences
- taxprofilerbioinformatics · metagenomics · microbiome · pipeline
Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
- aviaryassembly · bioinformatics · metagenomics
A hybrid assembly and MAG recovery pipeline (and more!)
- magassembly · bioinformatics · metagenomics
Assembly and binning of metagenomes
- BASALTbioinformatics · metagenomics · microbiome
Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequencing data
- dada2bioinformatics · metagenomics · microbiome
Accurate sample inference from amplicon data with single nucleotide resolution
- api.github.com/repos/grimmlab/MicrobiomeBestPracticeReviewretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2024-05-12, 128 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
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