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dada2

imported

software/dada2

Accurate sample inference from amplicon data with single nucleotide resolution

Machine-generated from the listed sources and not yet reviewed by a human.

dada2 project image
GitHub preview card for benjjneb/dada2. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
LGPL-3.0(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
benjjneb.github.io/dada2/
Repository
github.com/benjjneb/dada2
Documentation
unknown
Tags
amplicon · bioconductor · bioinformatics · metabarcoding · metagenomics · microbiome · taxonomy
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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  • swarmbioinformatics · metabarcoding · microbiome

    A robust and fast clustering method for amplicon-based studies

  • viralreconamplicon · metagenomics

    Assembly and intrahost/low-frequency variant calling for viral samples

  • GTDBTkbioinformatics · metagenomics · taxonomy

    GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

  • kaijubioinformatics · metagenomics · taxonomy

    Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

  • Metabulibioinformatics · metagenomics · taxonomy

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

sources
  1. api.github.com/repos/benjjneb/dada2
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-31, 554 stars, license reported as LGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/5.json→ .entries["dada2"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.