alevin-fry
importedsoftware/alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- COMBINE-lab
- Country
- unknown
- Homepage
- alevin-fry.readthedocs.io
- Repository
- github.com/COMBINE-lab/alevin-fry
- Documentation
- unknown
- Tags
- 10x · quantification · rna-seq · rust · single-cell · single-cell-rna-seq · transcriptomics
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- cirrocumulus10x · single-cell
Bring your single-cell data to life
- CITE-seq-Count10x · single-cell
A tool that allows to get UMI counts from a single cell protein assay
- fastq_utils10x · single-cell
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
- BRIDGEsingle-cell · single-cell-rna-seq · transcriptomics
Scientific Agent for evidence-grounded evaluation of cell-therapy products.
- PIASOsingle-cell · single-cell-rna-seq · transcriptomics
PIASO: Precise Integrative Analysis of Single-cell Omics
- scasasingle-cell · single-cell-rna-seq · transcriptomics
SCASA: Single cell transcript quantification tool
- api.github.com/repos/COMBINE-lab/alevin-fryretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-07-10, 214 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/6.json→ .entries["alevin-fry"]
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