BaseVarC
importedsoftware/basevarc
The repo was not under active development. Check out angsd toolkit for low depth data analyses.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/Zilong-Li/BaseVarC
- Documentation
- unknown
- Tags
- bioinformatics-tool · low-coverage-sequencing · population-genetics · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- BaseVar2low-coverage-sequencing · variant-calling
This is the official development repository for BaseVar, which call variants for large-scale ultra low-depth(<1.0x) WGS data, especially for NIPT data and ancient DNA
- grenepipepopulation-genetics · variant-calling
A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - for sampled individuals, and for pool sequencing.
- ClawBiopopulation-genetics
🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.
- eagerpopulation-genetics
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
- fwdpy11population-genetics
Forward-time simulation in Python using fwdpp
- get_phylomarkerspopulation-genetics
A pipeline to select optimal markers for microbial phylogenomics and species tree estimation using the multispecies coalescent and concatenation approaches
- api.github.com/repos/Zilong-Li/BaseVarCretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2020-09-02, 7 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/14.json→ .entries["basevarc"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.