biobear
importedsoftware/biobear
Work with bioinformatic files using Arrow, Polars, and/or DuckDB
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- wheretrue
- Country
- unknown
- Repository
- github.com/wheretrue/biobear
- Documentation
- unknown
- Tags
- arrow · bioinformatics · biology · biopython · duckdb · polars · pyarrow · python · rust-bio · samtools
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- biosetspolars · pyarrow
A bioinformatics extension of 🤗 Datasets library, built for ML applications on biological and omics data, offering easy integration of metadata and low-code data management tools.
- kmerustbioinformatics · rust-bio
Bioinformatics 101 tool for counting unique k-length substrings in DNA
- cogent3bioinformatics · biology · biopython
Comparative Genomics Toolkit 3
- seqan3bioinformatics · samtools
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
- snp-placerbioinformatics · samtools
Take information about snps on short sequence reads and accurately place the snps in a reference genome
- exonarrow · bioinformatics
Exon is an OLAP query engine specifically for biology and life science applications.
- api.github.com/repos/wheretrue/biobearretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-03-10, 196 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/55.json→ .entries["biobear"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.