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biobear

imported

software/biobear

Work with bioinformatic files using Arrow, Polars, and/or DuckDB

Machine-generated from the listed sources and not yet reviewed by a human.

biobear project image
GitHub preview card for wheretrue/biobear. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
maintained
Maturity
deployed
Organization
wheretrue
Country
unknown
Documentation
unknown
Tags
arrow · bioinformatics · biology · biopython · duckdb · polars · pyarrow · python · rust-bio · samtools
Regulatory
unknown
built by · 5

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • biosetspolars · pyarrow

    A bioinformatics extension of 🤗 Datasets library, built for ML applications on biological and omics data, offering easy integration of metadata and low-code data management tools.

  • kmerustbioinformatics · rust-bio

    Bioinformatics 101 tool for counting unique k-length substrings in DNA

  • cogent3bioinformatics · biology · biopython

    Comparative Genomics Toolkit 3

  • seqan3bioinformatics · samtools

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

  • snp-placerbioinformatics · samtools

    Take information about snps on short sequence reads and accurately place the snps in a reference genome

  • exonarrow · bioinformatics

    Exon is an OLAP query engine specifically for biology and life science applications.

sources
  1. api.github.com/repos/wheretrue/biobear
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2025-03-10, 196 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/55.json→ .entries["biobear"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.