snp-placer
importedsoftware/snp-placer
Take information about snps on short sequence reads and accurately place the snps in a reference genome
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/CNuge/snp-placer
- Documentation
- unknown
- Tags
- align-dna-sequences · bioinformatics · contigs · genome · pandas · samtools · snps · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- VariantCallersamtools · snps · variant-calling
VariantCaller is a wrapper for the 2022 gatk & bcftools best practices + phasing with WhatsHap.
- arvbioinformatics · genome · snps
A fast 23andMe DNA parser and inferrer for Python
- snippybioinformatics · snps · variant-calling
:scissors: :zap: Rapid haploid variant calling and core genome alignment
- biobearbioinformatics · samtools
Work with bioinformatic files using Arrow, Polars, and/or DuckDB
- seqan3bioinformatics · samtools
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
- snpkitsnps · variant-calling
Modular workflow for Microbial Variant Calling and SNP diagnostics.
- api.github.com/repos/CNuge/snp-placerretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2022-11-21, 4 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/24.json→ .entries["snp-placer"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.