bioinfo-notebook
importedsoftware/bioinfo-notebook
🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- rnnh.github.io/bioinfo-notebook/
- Repository
- github.com/rnnh/bioinfo-notebook
- Documentation
- unknown
- Tags
- bash · bash-script · bioconda · bioinformatics · bioinformatics-notebook · bioinformatics-programs · conda · fastq-dump · featurecounts · ubuntu · video-demonstration · windows-subsystem
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- hl7-hapi-fhir-obs-apibash · bash-script
Sample API that integrates with HAPI FHIR & HL7 Interfaces for Medical Information (Spring Boot Backend)
- MultiQCbioconda · bioinformatics
Aggregate results from bioinformatics analyses across many samples into a single report.
- pyrodigalbioconda · bioinformatics
Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
- run_dbcanbioconda · bioinformatics
Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
- seqfu2bioconda · bioinformatics
:rocket: seqfu - Sequece Fastx Utilities
- Snifflesbioconda · bioinformatics
Structural variation caller using third generation sequencing
- api.github.com/repos/rnnh/bioinfo-notebookretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2020-11-12, 207 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/45.json→ .entries["bioinfo-notebook"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.