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CASSIA

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software/cassia

CASSIA: A Multi-Agent LLM-Based Single-Cell Cell Type Annotation Framework

Machine-generated from the listed sources and not yet reviewed by a human.

CASSIA project image
GitHub preview card for ElliotXie/CASSIA. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
elliotxie.github.io/CASSIA/
Repository
github.com/ElliotXie/CASSIA
Documentation
unknown
Tags
ai4science · annotation · bioinformatics · cell-annotation · llm · multiagent-systems · prompt-engineering · retrieved-augmented-generation
Regulatory
unknown
built by · 5

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • cbt-llm-kitllm · prompt-engineering

    Guided CBT (Cognitive Behavioral Therapy) thought records for any AI assistant — structured 12-step flow, daily check-ins, and pattern analysis. Works with Claude, Gemini, Cursor, and more.

  • hce-classificationcell-annotation

    Code to implement the hierarchical cross-entropy loss for single-cell annotation models

  • PySingleCellNetcell-annotation

    singleCellNet in Python

  • cell-annotatorannotation · llm

    Automatically annotate cell types, consistently across samples.

  • BASALTai4science · bioinformatics

    Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequencing data

  • ChatCellai4science · bioinformatics

    ChatCell: Facilitating Single-Cell Analysis with Natural Language

sources
  1. api.github.com/repos/ElliotXie/CASSIA
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-06-21, 100 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/17.json→ .entries["cassia"]

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