covvfit

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

active

Maturity

deployed

Organization

cbg-ethz

Country

unknown

Homepage

cbg-ethz.github.io/covvfit/

Repository

github.com/cbg-ethz/covvfit

Documentation

unknown

Tags

epidemiology · fitness-landscape · forecasting-models · sars-cov-2 · statistical-modeling · virology · wastewater-based-epidemiology · wastewater-surveillance

Regulatory

unknown

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• COVID-19-dataepidemiology · virology

  Unpivoted and cleaned data sets on the COVID-19 pandemic

• viralmetagenomeepidemiology · virology

  A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.

• walkercreekwastewater-surveillance

  A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.

• WisePulsewastewater-surveillance

  WISE Loculus with V-Pipe – Infra for start-to-end viral wastewater analysis.

• chicago_sentinel_surveillanceepidemiology · sars-cov-2

  Tracking changes in SARS-CoV-2 transmission with a novel outpatient sentinel surveillance system in Chicago, USA.

• cov-spectrum-websiteepidemiology · sars-cov-2

  A web platform to detect and analyze variants of SARS-CoV-2

1. api.github.com/repos/cbg-ethz/covvfit
   retrieved 2026-08-25 · via github-api

   Machine-imported from GitHub search. Last push 2026-06-01, 3 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

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/v1/entries/54.json→ .entries["covvfit"]

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