fermikit

Category

Software & Systems

Subcategory

unknown

License

MIT(osi)

Status

dormant

Maturity

deployed

Organization

unknown

Country

unknown

Homepage

unknown

Repository

github.com/lh3/fermikit

Documentation

unknown

Tags

bioinformatics · denovo-assembly · genomics · variant-calling

Regulatory

unknown

• lh3
• mlin

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

• fermi-litebioinformatics · denovo-assembly · genomics

  Standalone C library for assembling Illumina short reads in small regions

• hifiasmbioinformatics · denovo-assembly · genomics

  Hifiasm: a haplotype-resolved assembler for accurate Hifi reads

• miniasmbioinformatics · denovo-assembly · genomics

  Ultrafast de novo assembly for long noisy reads (though having no consensus step)

• Corticalldenovo-assembly · variant-calling

  Germline DNM caller based on LdBG assembly of pathogens

• BALSAMICbioinformatics · genomics · variant-calling

  Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer

• CalliNGS-NFbioinformatics · genomics · variant-calling

  GATK RNA-Seq Variant Calling in Nextflow

1. api.github.com/repos/lh3/fermikit
   retrieved 2026-08-25 · via github-api

   Machine-imported from GitHub search. Last push 2020-11-30, 110 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as MIT, because GitHub's detector does not recognise open hardware licences.

Not yet verified by a human. Correct this record →

/v1/entries/16.json→ .entries["fermikit"]

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