GAGE-seq
importedsoftware/gage-seq
Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- maintained
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/ma-compbio/GAGE-seq
- Documentation
- unknown
- Tags
- 3d-genome · epigenomics · schi-c · scrna-seq · single-cell
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- Fast-Higashi3d-genome · single-cell
single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, tensor decomposition
- Higashi3d-genome · single-cell
single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, hypergraph
- scGHOST3d-genome · single-cell
single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment
- ALLCoolsepigenomics · single-cell
Toolkit for single-cell DNA methylation analysis.
- bapepigenomics · single-cell
Bead-based single-cell atac processing
- HGG-oncohistonesepigenomics · single-cell
Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" (Jessa et al, Nature Genetics, 2022)
- api.github.com/repos/ma-compbio/GAGE-seqretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2025-10-06, 16 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/27.json→ .entries["gage-seq"]
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