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gambit

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software/gambit

A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.

Machine-generated from the listed sources and not yet reviewed by a human.

gambit project image
GitHub preview card for jlumpe/gambit. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
AGPL-3.0(osi)
Status
active
Maturity
deployed
Organization
unknown
Country
unknown
Homepage
unknown
Repository
github.com/jlumpe/gambit
Documentation
unknown
Tags
bioinformatics · genomics · microbiology · public-health · whole-genome-sequencing
Regulatory
unknown
built by · 1

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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    Scalable SQLite database for fast querying of gnomAD variant annotations (allele frequency, depth, population metrics). Supports gnomAD v2-v4, WGS and WES.

  • vcfdistbioinformatics · genomics · whole-genome-sequencing

    vcfdist: Accurately benchmarking phased variant calls

  • bac-genomics-scriptsbioinformatics · genomics · microbiology

    Collection of scripts for bacterial genomics

  • BRIGbioinformatics · genomics · microbiology

    BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.

  • NGSOmics_Programminggenomics · whole-genome-sequencing

    Computational biology/bioinformatics workflows, codes, tech & concept notes on NGS data

  • ilusbioinformatics · whole-genome-sequencing

    A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis by using GATK and Sentieon. 一个基于 GATK 和 Sentieon 的简易且全面的…

sources
  1. api.github.com/repos/jlumpe/gambit
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-07-11, 35 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/3.json→ .entries["gambit"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.