gnomAD_DB
importedsoftware/gnomad-db
Scalable SQLite database for fast querying of gnomAD variant annotations (allele frequency, depth, population metrics). Supports gnomAD v2-v4, WGS and WES.
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- MIT(osi)
- Status
- active
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Repository
- github.com/KalinNonchev/gnomAD_DB
- Documentation
- unknown
- Tags
- allele-frequency · annotation · bioinformatics · database · exome-sequencing · genetics · genomics · gnomad · population-genetics · python · rare-variant-analysis · sqlite · variant-analysis · variant-annotation · vcf · whole-genome-sequencing
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- slivargenomics · rare-variant-analysis · variant-analysis
genetic variant expressions, annotation, and filtering for great good.
- snputilsbioinformatics · genetics · genomics · population-genetics · vcf
Python toolkit for fast genotype I/O, ancestry analysis, population-genetics statistics, genotype QC, GWAS, and visualization
- vcfdistbioinformatics · genomics · vcf · whole-genome-sequencing
vcfdist: Accurately benchmarking phased variant calls
- panpopbioinformatics · genomics · population-genetics · vcf
Application of pan-genome for population
- tomahawkbioinformatics · genetics · genomics · population-genetics
Fast calculations of linkage-disequilibrium in large-scale human cohorts
- vcfannoannotation · bioinformatics · genomics · vcf
annotate a VCF with other VCFs/BEDs/tabixed files
- api.github.com/repos/KalinNonchev/gnomAD_DBretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2026-07-21, 53 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/58.json→ .entries["gnomad-db"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.