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gatk

imported

software/gatk

Official code repository for GATK versions 4 and up

Machine-generated from the listed sources and not yet reviewed by a human.

gatk project image
GitHub preview card for broadinstitute/gatk. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
Apache-2.0(osi)
Status
active
Maturity
deployed
Organization
broadinstitute
Country
unknown
Homepage
software.broadinstitute.org/gatk
Repository
github.com/broadinstitute/gatk
Documentation
unknown
Tags
bioinformatics · dna · gatk · genome · genomics · ngs · science · sequencing · spark
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • catchbioinformatics · dna · genome · genomics · ngs · sequencing

    A package for designing compact and comprehensive capture probe sets.

  • galaxybioinformatics · dna · genomics · ngs · sequencing

    Data intensive science for everyone.

  • GenomicsDBbioinformatics · gatk · genomics · spark

    High performance data storage for importing, querying and transforming variants.

  • CalliNGS-NFbioinformatics · gatk · genomics · ngs

    GATK RNA-Seq Variant Calling in Nextflow

  • ugenebioinformatics · dna · ngs · sequencing

    UGENE is free open-source cross-platform bioinformatics software

  • deepsomaticbioinformatics · dna · genome · genomics

    DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing data.

sources
  1. api.github.com/repos/broadinstitute/gatk
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2026-08-25, 1991 stars, license reported as NOASSERTION. Category and schematic were assigned by keyword heuristics and are unreviewed. GitHub reported NOASSERTION; the licence was read from the LICENSE file as Apache-2.0, because GitHub's detector does not recognise open hardware licences.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/56.json→ .entries["gatk"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.