gatkVariantCalling
importedsoftware/gatkvariantcalling
Snakemake pipeline for variant calling using GATK
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- unknown
- Country
- unknown
- Homepage
- unknown
- Documentation
- unknown
- Tags
- gatk4 · pipeline · snakemake · variant-calling
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- rnavargatk4 · pipeline · variant-calling
gatk4 RNA variant calling pipeline
- snakemake-illumina-gatkvariantgatk4 · variant-calling
A Snakemake workflow for variant calling using GATK4 best practices
- sarekgatk4
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
- kGWASflowpipeline · snakemake
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
- mapachepipeline · snakemake
mapping pipeline for ancient DNA
- phylociraptorpipeline · snakemake
rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference
- api.github.com/repos/SherineAwad/gatkVariantCallingretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2023-03-03, 5 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/35.json→ .entries["gatkvariantcalling"]
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