gctree
importedsoftware/gctree
GCtree: phylogenetic inference of genotype-collapsed trees
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- GPL-3.0(osi)
- Status
- dormant
- Maturity
- deployed
- Organization
- matsengrp
- Country
- unknown
- Homepage
- matsengrp.github.io/gctree
- Repository
- github.com/matsengrp/gctree
- Documentation
- unknown
- Tags
- phylogenetics · single-cell
- Regulatory
- unknown
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- scarletphylogenetics · single-cell
SCARLET (Single-cell Algorithm for Reconstructing Loss-supported Evolution of Tumors) is an algorithm that reconstructs tumor phylogenies from single-cell DNA sequencing data. SCARLET uses a…
- scistreerphylogenetics · single-cell
R/Rcpp implementation of the ScisTree algorithm
- scphylo-toolsphylogenetics · single-cell
A python toolkit for single-cell tumor phylogenetic analysis
- trisicellphylogenetics · single-cell
Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data
- ANIclustermapphylogenetics
A tool for drawing ANI clustermap between all-vs-all microbial genomes
- AvPphylogenetics
Automatic evaluation of HGTs
- api.github.com/repos/matsengrp/gctreeretrieved 2026-08-25 · via github-api
Machine-imported from GitHub search. Last push 2024-08-27, 18 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/3.json→ .entries["gctree"]
Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.