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hadge

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software/hadge

Comprehensive pipeline for donor demultiplexing in single cell

Machine-generated from the listed sources and not yet reviewed by a human.

hadge project image
GitHub preview card for nf-core/hadge. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
MIT(osi)
Status
active
Maturity
deployed
Organization
nf-core
Country
unknown
Homepage
nf-co.re/hadge/dev
Repository
github.com/nf-core/hadge
Documentation
unknown
Tags
cell-hashing · deconvolution · demultiplexing · donor-assignment · donor-deconvolution · genetic-demultiplexing · genotype-deconvolution · hashing-deconvolution · hashtag-oligonucleotides · hto · nextflow · nf-core · pipeline · single-cell · workflow
Regulatory
unknown
similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

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  • pixelatornextflow · nf-core · pipeline · single-cell · workflow

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  • bactmapnextflow · nf-core · pipeline · workflow

    A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

  • circdnanextflow · nf-core · pipeline · workflow

    Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

  • circrnanextflow · nf-core · pipeline · workflow

    circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

sources
  1. api.github.com/repos/nf-core/hadge
    retrieved 2026-08-25 · via github-api

    Machine-imported from GitHub search. Last push 2026-08-25, 26 stars, license reported as MIT. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/62.json→ .entries["hadge"]

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