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kaiju

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software/kaiju

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

Machine-generated from the listed sources and not yet reviewed by a human.

kaiju project image
GitHub preview card for bioinformatics-centre/kaiju. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
GPL-3.0(osi)
Status
active
Maturity
deployed
Organization
bioinformatics-centre
Country
unknown
Homepage
kaiju.binf.ku.dk
Repository
github.com/bioinformatics-centre/kaiju
Documentation
unknown
Tags
bioinformatics · metagenomics · next-generation-sequencing · taxonomic-classification · taxonomy
Regulatory
unknown
built by · 6

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • Metabulibioinformatics · metagenomics · taxonomic-classification · taxonomy

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

  • taxprofilerbioinformatics · metagenomics · taxonomic-classification

    Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

  • dada2bioinformatics · metagenomics · taxonomy

    Accurate sample inference from amplicon data with single nucleotide resolution

  • GTDBTkbioinformatics · metagenomics · taxonomy

    GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

  • ANIclustermapbioinformatics · taxonomy

    A tool for drawing ANI clustermap between all-vs-all microbial genomes

  • migabioinformatics · taxonomy

    MiGA: Microbial Genomes Atlas

sources
  1. api.github.com/repos/bioinformatics-centre/kaiju
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2026-06-09, 305 stars, license reported as GPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/41.json→ .entries["kaiju"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.