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lodestone

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software/lodestone

Mycobacterial pipeline

Machine-generated from the listed sources and not yet reviewed by a human.

lodestone project image
GitHub preview card for Pathogen-Genomics-Cymru/lodestone. Served by its origin, not stored here, and not covered by this registry’s licence.
record
Category
Software & Systems
Subcategory
unknown
License
AGPL-3.0(osi)
Status
maintained
Maturity
deployed
Organization
Pathogen-Genomics-Cymru
Country
unknown
Homepage
unknown
Repository
github.com/Pathogen-Genomics-Cymru/lodestone
Documentation
unknown
Tags
bioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · nextflow · pathogen
Regulatory
unknown
built by · 5

Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.

similar by tags

Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.

  • albatradisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Comparative TraDIS analysis

  • aribabioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Antimicrobial Resistance Identification By Assembly

  • Artemisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation

  • Bio-Tradisbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    A set of tools to analyse the output from TraDIS analyses

  • circlatorbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    A tool to circularize genome assemblies

  • gff3toemblbioinformatics · bioinformatics-pipeline · genomics · global-health · infectious-diseases · next-generation-sequencing · pathogen

    Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI

sources
  1. api.github.com/repos/Pathogen-Genomics-Cymru/lodestone
    retrieved 2026-08-05 · via github-api

    Machine-imported from GitHub search. Last push 2025-09-11, 11 stars, license reported as AGPL-3.0. Category and schematic were assigned by keyword heuristics and are unreviewed.

Not yet verified by a human. Correct this record →

machine-readable

/v1/entries/44.json→ .entries["lodestone"]

Entries are sharded 64 ways by a stable hash of the id, so a consumer can find any record without an index.