long-read-pipelines
importedsoftware/long-read-pipelines
Long read production pipelines
Machine-generated from the listed sources and not yet reviewed by a human.
- Category
- Software & Systems
- Subcategory
- unknown
- License
- BSD-3-Clause(osi)
- Status
- active
- Maturity
- deployed
- Organization
- broadinstitute
- Country
- unknown
- Documentation
- unknown
- Tags
- de-novo-assembly · long-reads · pipelines · variant-calling · wdl
- Regulatory
- unknown
Top contributors by commit count, from the project’s public repository. Avatars are served by their origin, not stored here. To be removed from this list, open an issue.
Computed from shared tags, weighted so a rare tag counts for more than a common one. These are suggestions, not curated relationships.
- Reads2Mappipelines · variant-calling · wdl
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
- pepperlong-reads · variant-calling
PEPPER-Margin-DeepVariant
- Varathonlong-reads · variant-calling
A scalable variant calling and benchmarking framework supporting both short and long reads.
- dockstorewdl
An app store for scientific workflows, tools, notebooks, and services
- sprocketwdl
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
- wdlwdl
Specification for the Workflow Description Language (WDL).
- api.github.com/repos/broadinstitute/long-read-pipelinesretrieved 2026-08-05 · via github-api
Machine-imported from GitHub search. Last push 2026-08-04, 151 stars, license reported as BSD-3-Clause. Category and schematic were assigned by keyword heuristics and are unreviewed.
Not yet verified by a human. Correct this record →
/v1/entries/56.json→ .entries["long-read-pipelines"]
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